Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10553J3QPF1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10553J3QPF1 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Gm10553J3QPF1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10553J3QPF1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10□□□□□ -0.81
Gm10553J3QPF1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Gm10553J3QPF1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Mir874-201ENSMUST00000104769 76 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm13123-201ENSMUST00000122173 492 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm37922-201ENSMUST00000195596 455 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm6458-201ENSMUST00000211573 635 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm45684-201ENSMUST00000210244 1571 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Gm10553J3QPF1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Mir1982-201ENSMUST00000157368 74 ntBASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm29127-201ENSMUST00000188304 517 ntBASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm18062-201ENSMUST00000208020 547 ntBASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm18055-201ENSMUST00000208254 547 ntBASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Gm10146-201ENSMUST00000072739 309 ntBASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Gm10553J3QPF1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms