Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc188F6WEU2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc188F6WEU2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc188F6WEU2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc188F6WEU2 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm12943-201ENSMUST00000119616 210 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm14219-201ENSMUST00000120414 288 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm10731-201ENSMUST00000181171 448 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm18038-201ENSMUST00000197900 485 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm17831-201ENSMUST00000205579 900 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm6905-201ENSMUST00000205729 511 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.07□□□□□ -0.32
Ccdc188F6WEU2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc188F6WEU2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms