Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm15370-201ENSMUST00000117158 253 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm27243-201ENSMUST00000183964 521 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm37489-201ENSMUST00000191883 159 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm38158-201ENSMUST00000194617 339 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm38341-201ENSMUST00000195357 515 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm18584-201ENSMUST00000203098 964 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm45865-201ENSMUST00000211815 945 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm8227-201ENSMUST00000223306 571 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Srp54bE9PXC0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Gm13297-201ENSMUST00000120205 934 ntBASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Mospd4-201ENSMUST00000180618 576 ntBASIC12.87□□□□□ -0.35
Srp54bE9PXC0 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms