Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.74□□□□□ -0.37
Clip3B9EHT4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Gm27847-201ENSMUST00000183711 107 ntBASIC12.74□□□□□ -0.37
Clip3B9EHT4 Gm27375-201ENSMUST00000183799 107 ntBASIC12.74□□□□□ -0.37
Clip3B9EHT4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.74□□□□□ -0.37
Clip3B9EHT4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm12403-201ENSMUST00000121384 959 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gm26315-201ENSMUST00000083890 321 ntBASIC12.73□□□□□ -0.37
Clip3B9EHT4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.73□□□□□ -0.37
Clip3B9EHT4 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.72□□□□□ -0.37
Clip3B9EHT4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clip3B9EHT4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms