Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.03□□□□□ -0.64
Col6a4A2AX52 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Gm8385-201ENSMUST00000058999 643 ntBASIC11.03□□□□□ -0.64
Col6a4A2AX52 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.03□□□□□ -0.64
Col6a4A2AX52 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col6a4A2AX52 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Gm13665-201ENSMUST00000120830 528 ntBASIC11.02□□□□□ -0.64
Col6a4A2AX52 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col6a4A2AX52 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12616-201ENSMUST00000118594 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm6447-201ENSMUST00000118905 835 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12624-201ENSMUST00000177615 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12621-201ENSMUST00000177760 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12615-201ENSMUST00000177970 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12622-201ENSMUST00000177975 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12627-201ENSMUST00000178412 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12625-201ENSMUST00000179122 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12614-201ENSMUST00000179586 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm12613-201ENSMUST00000180323 382 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.02□□□□□ -0.65
Col6a4A2AX52 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col6a4A2AX52 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Snord83b-201ENSMUST00000104546 94 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm8584-201ENSMUST00000171982 758 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm28693-202ENSMUST00000190758 331 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.01□□□□□ -0.65
Col6a4A2AX52 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms