Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Gm7775-201ENSMUST00000218871 853 ntBASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav12d-1A0N8R0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm11594-201ENSMUST00000122313 162 ntBASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm22175-201ENSMUST00000175007 78 ntBASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm38294-201ENSMUST00000192831 381 ntBASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm43514-201ENSMUST00000198852 424 ntBASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav12d-1A0N8R0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms