Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Gm38241-201ENSMUST00000192641 898 ntBASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Gm18935-201ENSMUST00000212692 664 ntBASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cfap99A0A140LIX9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.63■□□□□ 0.09
Cfap99A0A140LIX9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Gm43133-201ENSMUST00000197472 463 ntBASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cfap99A0A140LIX9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gm15236-201ENSMUST00000117309 379 ntBASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gm4857-201ENSMUST00000192718 785 ntBASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gm9368-201ENSMUST00000219348 831 ntBASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cfap99A0A140LIX9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cfap99A0A140LIX9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms