Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm25287-201ENSMUST00000103846 110 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm22918-201ENSMUST00000103855 110 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm9824-201ENSMUST00000178707 561 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm6443-201ENSMUST00000203599 874 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC131710.1-201ENSMUST00000228336 990 ntBASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Mir1895-201ENSMUST00000122615 79 ntBASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.9□□□□□ -0.82
Trav3n-3A0A0G2JEM0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Trav3n-3A0A0G2JEM0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.9□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3n-3A0A0G2JEM0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms