Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav18A0A075B656 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.72□□□□□ -0.69
Trav18A0A075B656 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.72□□□□□ -0.69
Trav18A0A075B656 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Gm5867-201ENSMUST00000063197 592 ntBASIC10.72□□□□□ -0.69
Trav18A0A075B656 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav18A0A075B656 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 Gm15321-201ENSMUST00000121290 288 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Gm42550-201ENSMUST00000201553 960 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav18A0A075B656 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav18A0A075B656 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.71□□□□□ -0.69
Trav18A0A075B656 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms