Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm15483-201ENSMUST00000120338 456 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm13597-201ENSMUST00000121239 375 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm27301-201ENSMUST00000184012 127 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm5864-201ENSMUST00000202263 970 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 AC139350.3-201ENSMUST00000226151 420 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Mir874-201ENSMUST00000104769 76 ntBASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Gm5177-201ENSMUST00000183092 997 ntBASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Gm28659-201ENSMUST00000188013 759 ntBASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Gm18195-201ENSMUST00000207604 706 ntBASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 AC121598.1-201ENSMUST00000228224 1019 ntBASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trav8-1A0A075B641 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trav8-1A0A075B641 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms