Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Mir5126-201ENSMUST00000175513 77 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm6916-202ENSMUST00000205523 195 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 AC138604.1-201ENSMUST00000226969 739 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 AC154806.6-201ENSMUST00000228192 202 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav7n-4A0A075B620 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Gm15427-201ENSMUST00000117288 531 ntBASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trav7n-4A0A075B620 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trav7n-4A0A075B620 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms