Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-5A0A075B604 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.74□□□□□ -0.69
Trav7n-5A0A075B604 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-5A0A075B604 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm8805-201ENSMUST00000117848 313 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm26927-201ENSMUST00000182385 965 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm18062-201ENSMUST00000208020 547 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm18055-201ENSMUST00000208254 547 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm10146-201ENSMUST00000072739 309 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-5A0A075B604 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gm26185-201ENSMUST00000157692 266 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gm45784-201ENSMUST00000188360 142 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-5A0A075B604 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms