Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClcnkaQ9WUB7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm6745-201ENSMUST00000199216 526 ntBASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClcnkaQ9WUB7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
ClcnkaQ9WUB7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClcnkaQ9WUB7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.08□□□□□ -0.48
ClcnkaQ9WUB7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClcnkaQ9WUB7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms