Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm15370-201ENSMUST00000117158 253 ntBASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Gm22323-201ENSMUST00000103832 109 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.07□□□□□ -0.32
Scn8aQ9WTU3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Scn8aQ9WTU3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms