Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Gm15770-201ENSMUST00000117498 584 ntBASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Gm12490-201ENSMUST00000120255 560 ntBASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Gm23984-201ENSMUST00000157139 203 ntBASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Clcn2Q9R0A1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Clcn2Q9R0A1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.4□□□□□ -0.27
Clcn2Q9R0A1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Clcn2Q9R0A1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Clcn2Q9R0A1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Clcn2Q9R0A1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Gm8515-201ENSMUST00000194852 576 ntBASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Gm9908-201ENSMUST00000211534 448 ntBASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Clcn2Q9R0A1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Clcn2Q9R0A1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms