Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Clcf1Q9QZM3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Mir1982-201ENSMUST00000157368 74 ntBASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Proscos-202ENSMUST00000178990 666 ntBASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm29127-201ENSMUST00000188304 517 ntBASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 AY702102-202ENSMUST00000194651 1173 ntBASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Clcf1Q9QZM3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Clcf1Q9QZM3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Clcf1Q9QZM3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clcf1Q9QZM3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clcf1Q9QZM3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Clcf1Q9QZM3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm13226-201ENSMUST00000117838 404 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm8213-201ENSMUST00000118191 441 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm24644-201ENSMUST00000157114 139 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm29649-201ENSMUST00000185649 419 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Clcf1Q9QZM3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms