Protein–RNA interactions for Protein: Q9QZD4

Ercc4, DNA repair endonuclease XPF, mousemouse

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4Q9QZD4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Gm14057-201ENSMUST00000120631 482 ntBASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ercc4Q9QZD4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.21□□□□□ -0.14
Ercc4Q9QZD4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Mir874-201ENSMUST00000104769 76 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ercc4Q9QZD4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Gm38144-201ENSMUST00000192790 465 ntBASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Gm42550-201ENSMUST00000201553 960 ntBASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Gm26315-201ENSMUST00000083890 321 ntBASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ercc4Q9QZD4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms