Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Phtf1Q9QZ09 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Gm11637-201ENSMUST00000120601 592 ntBASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Gm18062-201ENSMUST00000208020 547 ntBASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Gm18055-201ENSMUST00000208254 547 ntBASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Phtf1Q9QZ09 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Snord83b-201ENSMUST00000104546 94 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm12363-201ENSMUST00000122250 668 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm10268-201ENSMUST00000085340 555 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.36□□□□□ -0.11
Phtf1Q9QZ09 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Phtf1Q9QZ09 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms