Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm12291-201ENSMUST00000121627 311 ntBASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm26927-201ENSMUST00000182385 965 ntBASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm37042-201ENSMUST00000193816 581 ntBASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.59□□□□□ -0.39
Upk3aQ9JKX8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Upk3aQ9JKX8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.58□□□□□ -0.39
Upk3aQ9JKX8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Upk3aQ9JKX8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Upk3aQ9JKX8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gm26185-201ENSMUST00000157692 266 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gm27682-201ENSMUST00000183930 110 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gm43818-201ENSMUST00000200605 466 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Upk3aQ9JKX8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm17208-201ENSMUST00000168388 535 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.57□□□□□ -0.4
Upk3aQ9JKX8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms