Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.29□□□□□ -0.44
Hmgn3Q9DCB1 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Gm27525-201ENSMUST00000184465 107 ntBASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Gm5264-201ENSMUST00000190584 848 ntBASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hmgn3Q9DCB1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hmgn3Q9DCB1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Gm13385-201ENSMUST00000121089 220 ntBASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hmgn3Q9DCB1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Gm11745-201ENSMUST00000121669 448 ntBASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Rprl2-201ENSMUST00000157150 290 ntBASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hmgn3Q9DCB1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms