Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm32025-201ENSMUST00000217960 307 ntBASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rita1Q9D1H0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Mir874-201ENSMUST00000104769 76 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm11591-201ENSMUST00000120063 702 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm19184-201ENSMUST00000196798 928 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rita1Q9D1H0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rita1Q9D1H0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Gm14704-201ENSMUST00000120300 874 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rita1Q9D1H0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.02□□□□□ -0.49
Rita1Q9D1H0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms