Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.29□□□□□ -0.12
Ssr1Q9CY50 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.28□□□□□ -0.12
Ssr1Q9CY50 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm27989-201ENSMUST00000184721 107 ntBASIC14.28□□□□□ -0.12
Ssr1Q9CY50 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.28□□□□□ -0.12
Ssr1Q9CY50 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssr1Q9CY50 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Gm15240-201ENSMUST00000118156 720 ntBASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Gm9522-201ENSMUST00000182394 926 ntBASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssr1Q9CY50 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ssr1Q9CY50 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms