Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Gm14028-201ENSMUST00000117434 479 ntBASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Nsd1-205ENSMUST00000224693 852 ntBASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.23■□□□□ 0.19
Nip7Q9CXK8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm14277-201ENSMUST00000121195 360 ntBASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nip7Q9CXK8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nip7Q9CXK8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.21■□□□□ 0.18
Nip7Q9CXK8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nip7Q9CXK8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm12058-201ENSMUST00000118614 437 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm4909-201ENSMUST00000118749 794 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm13665-201ENSMUST00000120830 528 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 B9d1os-201ENSMUST00000137010 674 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm25043-201ENSMUST00000158604 212 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Mir6979-201ENSMUST00000183927 56 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm8885-201ENSMUST00000189382 598 ntBASIC16.2■□□□□ 0.18
Nip7Q9CXK8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.2■□□□□ 0.18
Nip7Q9CXK8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms