Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Gm38294-201ENSMUST00000192831 381 ntBASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Gm18905-201ENSMUST00000205454 928 ntBASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Gm7775-201ENSMUST00000218871 853 ntBASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ska1Q9CPV1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ska1Q9CPV1 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ska1Q9CPV1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.39□□□□□ -0.43
Ska1Q9CPV1 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.39□□□□□ -0.43
Ska1Q9CPV1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.39□□□□□ -0.43
Ska1Q9CPV1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ska1Q9CPV1 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Gm4875-201ENSMUST00000118257 786 ntBASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Gm13223-201ENSMUST00000118609 747 ntBASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ska1Q9CPV1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms