Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gtf2a1Q99PM3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gtf2a1Q99PM3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gtf2a1Q99PM3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gtf2a1Q99PM3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Gm22240-201ENSMUST00000175225 82 ntBASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Gtf2a1Q99PM3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms