Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm2546-201ENSMUST00000182630 991 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Mir7032-201ENSMUST00000185154 79 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm28450-201ENSMUST00000187349 638 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 AU022133-201ENSMUST00000200601 873 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkx6-1Q99MA9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm11930-201ENSMUST00000117788 190 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm27046-201ENSMUST00000182160 463 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm44262-201ENSMUST00000204969 372 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Gm5950-201ENSMUST00000213337 772 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkx6-1Q99MA9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms