Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm26464-201ENSMUST00000157094 305 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm18307-201ENSMUST00000206864 949 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Gm5161-201ENSMUST00000075243 853 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp1b1Q99LU0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Chmp1b1Q99LU0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chmp1b1Q99LU0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Chmp1b1Q99LU0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm11424-201ENSMUST00000121929 829 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.39□□□□□ -0.43
Chmp1b1Q99LU0 Gm8515-201ENSMUST00000194852 576 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms