Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm13996-201ENSMUST00000118456 430 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm28450-201ENSMUST00000187349 638 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm43378-201ENSMUST00000199336 582 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm8385-201ENSMUST00000058999 643 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.76□□□□□ -0.21
Clp1Q99LI9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Clp1Q99LI9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.75□□□□□ -0.21
Clp1Q99LI9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Gm5523-201ENSMUST00000180415 997 ntBASIC13.75□□□□□ -0.21
Clp1Q99LI9 Gm8959-201ENSMUST00000213150 571 ntBASIC13.75□□□□□ -0.21
Clp1Q99LI9 Gm29787-201ENSMUST00000222129 849 ntBASIC13.75□□□□□ -0.21
Clp1Q99LI9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.75□□□□□ -0.21
Clp1Q99LI9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clp1Q99LI9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Clp1Q99LI9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.74□□□□□ -0.21
Clp1Q99LI9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Gm23200-201ENSMUST00000104379 132 ntBASIC13.74□□□□□ -0.21
Clp1Q99LI9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Gm13736-201ENSMUST00000119272 253 ntBASIC13.74□□□□□ -0.21
Clp1Q99LI9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Gm27023-201ENSMUST00000182372 285 ntBASIC13.74□□□□□ -0.21
Clp1Q99LI9 Mir7221-201ENSMUST00000184009 72 ntBASIC13.74□□□□□ -0.21
Clp1Q99LI9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.74□□□□□ -0.21
Clp1Q99LI9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clp1Q99LI9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms