Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm2260-201ENSMUST00000184965 657 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm3786-201ENSMUST00000202659 378 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm22058-201ENSMUST00000083393 310 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Daam2-202ENSMUST00000224595 1926 ntBASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smarcd2Q99JR8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Gm15547-201ENSMUST00000122152 333 ntBASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Gm23363-201ENSMUST00000175024 79 ntBASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Gm43138-201ENSMUST00000199123 708 ntBASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.18□□□□□ -0.3
Smarcd2Q99JR8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Mir874-201ENSMUST00000104769 76 ntBASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Gm14130-201ENSMUST00000118417 987 ntBASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 Gm13875-201ENSMUST00000120162 282 ntBASIC13.17□□□□□ -0.3
Smarcd2Q99JR8 AA914427-201ENSMUST00000193194 1166 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms