Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm2991-201ENSMUST00000173338 480 ntBASIC15.43■□□□□ 0.06
Col20a1Q923P0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.43■□□□□ 0.06
Col20a1Q923P0 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.42■□□□□ 0.06
Col20a1Q923P0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm12502-201ENSMUST00000120197 444 ntBASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm12291-201ENSMUST00000121627 311 ntBASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm23363-201ENSMUST00000175024 79 ntBASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm7584-201ENSMUST00000175829 940 ntBASIC15.42■□□□□ 0.06
Col20a1Q923P0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col20a1Q923P0 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.41■□□□□ 0.06
Col20a1Q923P0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.41■□□□□ 0.06
Col20a1Q923P0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Gm6621-201ENSMUST00000193251 772 ntBASIC15.41■□□□□ 0.06
Col20a1Q923P0 Morn2-202ENSMUST00000227729 656 ntBASIC15.41■□□□□ 0.06
Col20a1Q923P0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Col20a1Q923P0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Col20a1Q923P0 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms