Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SfpqQ8VIJ6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SfpqQ8VIJ6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SfpqQ8VIJ6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SfpqQ8VIJ6 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.83□□□□□ -0.19
SfpqQ8VIJ6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SfpqQ8VIJ6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SfpqQ8VIJ6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SfpqQ8VIJ6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Gm6736-201ENSMUST00000166583 948 ntBASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SfpqQ8VIJ6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms