Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.56□□□□□ -0.24
Trim60Q8VI40 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Gm15376-201ENSMUST00000122258 783 ntBASIC13.56□□□□□ -0.24
Trim60Q8VI40 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Mir6956-201ENSMUST00000183598 62 ntBASIC13.56□□□□□ -0.24
Trim60Q8VI40 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.56□□□□□ -0.24
Trim60Q8VI40 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim60Q8VI40 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm24694-201ENSMUST00000180054 110 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm27663-201ENSMUST00000184839 110 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm29667-201ENSMUST00000190817 490 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Gm38223-201ENSMUST00000194484 695 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.55□□□□□ -0.24
Trim60Q8VI40 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim60Q8VI40 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Gm28760-201ENSMUST00000185995 736 ntBASIC13.54□□□□□ -0.24
Trim60Q8VI40 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim60Q8VI40 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.54□□□□□ -0.24
Trim60Q8VI40 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.54□□□□□ -0.24
Trim60Q8VI40 Gm26315-201ENSMUST00000083890 321 ntBASIC13.54□□□□□ -0.24
Trim60Q8VI40 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.54□□□□□ -0.24
Trim60Q8VI40 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim60Q8VI40 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms