Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cd109Q8R422 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Cd109Q8R422 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC18.38■□□□□ 0.53
Cd109Q8R422 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Cd109Q8R422 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
Cd109Q8R422 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC18.38■□□□□ 0.53
Cd109Q8R422 AC125209.1-201ENSMUST00000225812 766 ntBASIC18.38■□□□□ 0.53
Cd109Q8R422 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.38■□□□□ 0.53
Cd109Q8R422 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Cd109Q8R422 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cd109Q8R422 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC18.37■□□□□ 0.53
Cd109Q8R422 Gm13315-201ENSMUST00000120376 991 ntBASIC18.37■□□□□ 0.53
Cd109Q8R422 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC18.37■□□□□ 0.53
Cd109Q8R422 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cd109Q8R422 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cd109Q8R422 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 Gm4909-201ENSMUST00000118749 794 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 Gm12217-201ENSMUST00000118858 696 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 Gm13813-201ENSMUST00000120998 787 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC18.36■□□□□ 0.53
Cd109Q8R422 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cd109Q8R422 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC18.36■□□□□ 0.53
Cd109Q8R422 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC18.36■□□□□ 0.53
Cd109Q8R422 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 AC154222.2-201ENSMUST00000225848 607 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 AC123665.1-201ENSMUST00000228204 438 ntBASIC18.36■□□□□ 0.53
Cd109Q8R422 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.36■□□□□ 0.53
Cd109Q8R422 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cd109Q8R422 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cd109Q8R422 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd109Q8R422 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms