Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccdc58Q8R3Q6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc58Q8R3Q6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm22065-201ENSMUST00000103753 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm22066-201ENSMUST00000103761 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24932-201ENSMUST00000103763 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24115-201ENSMUST00000103799 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm22190-201ENSMUST00000103827 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm22191-201ENSMUST00000103831 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24721-201ENSMUST00000103849 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm28018-201ENSMUST00000103869 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm26399-201ENSMUST00000103937 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm11779-201ENSMUST00000118541 368 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm25349-201ENSMUST00000177728 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm23616-201ENSMUST00000177797 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm25871-201ENSMUST00000177816 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24752-201ENSMUST00000178240 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24496-201ENSMUST00000178287 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm25649-201ENSMUST00000178476 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm25548-201ENSMUST00000178681 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm23147-201ENSMUST00000178841 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm26095-201ENSMUST00000179270 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm22171-201ENSMUST00000179283 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm23936-201ENSMUST00000179354 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm22619-201ENSMUST00000179516 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm25255-201ENSMUST00000179579 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24755-201ENSMUST00000179691 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm26506-201ENSMUST00000179692 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm25086-201ENSMUST00000179931 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm23243-201ENSMUST00000180047 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24659-201ENSMUST00000180212 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm24169-201ENSMUST00000180244 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm23689-201ENSMUST00000180354 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm27359-201ENSMUST00000184153 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm27785-201ENSMUST00000184268 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm27466-201ENSMUST00000184396 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm27703-201ENSMUST00000184836 110 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc58Q8R3Q6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc58Q8R3Q6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms