Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim29Q8R2Q0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm16202-201ENSMUST00000117532 544 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm14928-201ENSMUST00000120198 477 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm11918-201ENSMUST00000121660 179 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm11424-201ENSMUST00000121929 829 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm2495-201ENSMUST00000191160 466 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm6180-201ENSMUST00000065243 498 ntBASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim29Q8R2Q0 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim29Q8R2Q0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Gm6745-201ENSMUST00000199216 526 ntBASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.95□□□□□ -0.02
Trim29Q8R2Q0 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms