Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx54Q8K4L0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Gm19287-201ENSMUST00000203190 358 ntBASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Gm45598-202ENSMUST00000210719 986 ntBASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx54Q8K4L0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Ddx54Q8K4L0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Gm15515-201ENSMUST00000117827 822 ntBASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Gm43916-201ENSMUST00000205062 967 ntBASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Ddx54Q8K4L0 Gm6992-201ENSMUST00000217973 1607 ntBASIC17■□□□□ 0.31
Ddx54Q8K4L0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17■□□□□ 0.31
Ddx54Q8K4L0 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Gm14832-201ENSMUST00000121289 322 ntBASIC17■□□□□ 0.31
Ddx54Q8K4L0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17■□□□□ 0.31
Ddx54Q8K4L0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx54Q8K4L0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx54Q8K4L0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms