Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.02■□□□□ -0
Smc2Q8CG48 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smc2Q8CG48 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smc2Q8CG48 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smc2Q8CG48 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Smc2Q8CG48 Itm2b-204ENSMUST00000228637 783 ntBASIC15.02■□□□□ -0
Smc2Q8CG48 Gm15823-201ENSMUST00000064305 670 ntBASIC15.02■□□□□ -0
Smc2Q8CG48 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smc2Q8CG48 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smc2Q8CG48 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.01□□□□□ -0.01
Smc2Q8CG48 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15.01□□□□□ -0.01
Smc2Q8CG48 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smc2Q8CG48 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Smc2Q8CG48 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Smc2Q8CG48 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15□□□□□ -0.01
Smc2Q8CG48 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Smc2Q8CG48 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15□□□□□ -0.01
Smc2Q8CG48 Gm15429-201ENSMUST00000151268 798 ntBASIC15□□□□□ -0.01
Smc2Q8CG48 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15□□□□□ -0.01
Smc2Q8CG48 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Gm5866-201ENSMUST00000177881 973 ntBASIC15□□□□□ -0.01
Smc2Q8CG48 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Gm2423-201ENSMUST00000074863 733 ntBASIC15□□□□□ -0.01
Smc2Q8CG48 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smc2Q8CG48 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15□□□□□ -0.01
Smc2Q8CG48 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Smc2Q8CG48 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc2Q8CG48 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Smc2Q8CG48 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms