Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim52Q8CDV4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim52Q8CDV4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim52Q8CDV4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm45186-201ENSMUST00000206874 478 ntBASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim52Q8CDV4 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Gm13813-201ENSMUST00000120998 787 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Gm15547-201ENSMUST00000122152 333 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Gm44967-201ENSMUST00000207047 631 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trim52Q8CDV4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim52Q8CDV4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms