Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp44Q8C2S0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gm12363-201ENSMUST00000122250 668 ntBASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gm27682-201ENSMUST00000183930 110 ntBASIC15.3■□□□□ 0.04
Usp44Q8C2S0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.3■□□□□ 0.04
Usp44Q8C2S0 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp44Q8C2S0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.29■□□□□ 0.04
Usp44Q8C2S0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Usp44Q8C2S0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm13813-201ENSMUST00000120998 787 ntBASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.28■□□□□ 0.04
Usp44Q8C2S0 Gm32025-201ENSMUST00000217960 307 ntBASIC15.28■□□□□ 0.04
Usp44Q8C2S0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms