Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm43474-201ENSMUST00000196415 774 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm18892-201ENSMUST00000217628 881 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm10247-201ENSMUST00000090395 333 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 AC122887.2-201ENSMUST00000219465 1603 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.39□□□□□ -0.11
Trim35Q8C006 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim35Q8C006 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Snord70-201ENSMUST00000104157 87 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm3496-201ENSMUST00000188283 745 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm43125-201ENSMUST00000201724 730 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 AC160109.1-201ENSMUST00000225592 729 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 AC167192.1-201ENSMUST00000225908 139 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Krtap6-3-201ENSMUST00000079151 444 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.38□□□□□ -0.11
Trim35Q8C006 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Trim35Q8C006 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim35Q8C006 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim35Q8C006 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim35Q8C006 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim35Q8C006 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim35Q8C006 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.37□□□□□ -0.11
Trim35Q8C006 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim35Q8C006 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim35Q8C006 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms