Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm14219-201ENSMUST00000120414 288 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gm3329-201ENSMUST00000159873 556 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gm3332-201ENSMUST00000189337 928 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gm37201-201ENSMUST00000191845 523 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Mir7686-201ENSMUST00000200604 57 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gm10461-201ENSMUST00000202073 4786 ntBASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd9Q8BYH8 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Gm8738-201ENSMUST00000172606 329 ntBASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.17□□□□□ -0.78
Chd9Q8BYH8 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Gm10312-201ENSMUST00000078515 489 ntBASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd9Q8BYH8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm26368-201ENSMUST00000157826 118 ntBASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm29808-201ENSMUST00000194419 468 ntBASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Chd9Q8BYH8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms