Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup54Q8BTS4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup54Q8BTS4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup54Q8BTS4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup54Q8BTS4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm37042-201ENSMUST00000193816 581 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm4768-201ENSMUST00000206199 686 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gm19163-201ENSMUST00000223313 780 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup54Q8BTS4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm23931-201ENSMUST00000103842 109 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm12363-201ENSMUST00000122250 668 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm17208-201ENSMUST00000168388 535 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm27514-201ENSMUST00000183692 110 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm37424-201ENSMUST00000191727 561 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Snora73a-201ENSMUST00000082453 205 ntBASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nup54Q8BTS4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms