Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Gm12260-201ENSMUST00000122447 411 ntBASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Smco3Q8BQM7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smco3Q8BQM7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Smco3Q8BQM7 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm9727-201ENSMUST00000161387 555 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm18733-201ENSMUST00000173950 856 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Mir3113-201ENSMUST00000175478 76 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Mir8117-201ENSMUST00000184773 107 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm18049-201ENSMUST00000208909 581 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.77□□□□□ -0.69
Smco3Q8BQM7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.76□□□□□ -0.69
Smco3Q8BQM7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms