Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.09□□□□□ -0.15
Nop53Q8BK35 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nop53Q8BK35 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.08□□□□□ -0.15
Nop53Q8BK35 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nop53Q8BK35 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.08□□□□□ -0.16
Nop53Q8BK35 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm9522-201ENSMUST00000182394 926 ntBASIC14.08□□□□□ -0.16
Nop53Q8BK35 Mir7221-201ENSMUST00000184009 72 ntBASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm20445-201ENSMUST00000061905 565 ntBASIC14.08□□□□□ -0.16
Nop53Q8BK35 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.08□□□□□ -0.16
Nop53Q8BK35 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nop53Q8BK35 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm12485-201ENSMUST00000119641 291 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm12403-201ENSMUST00000121384 959 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm21854-201ENSMUST00000179901 471 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm37319-201ENSMUST00000193500 636 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm6218-201ENSMUST00000219812 628 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.07□□□□□ -0.16
Nop53Q8BK35 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nop53Q8BK35 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nop53Q8BK35 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms