Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chmp2bQ8BJF9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Gm15376-201ENSMUST00000122258 783 ntBASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Gm43094-201ENSMUST00000196549 921 ntBASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Chmp2bQ8BJF9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp2bQ8BJF9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms