Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Prpf40bQ80W14 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Gm4986-201ENSMUST00000119731 549 ntBASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Gm6222-202ENSMUST00000182143 629 ntBASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.12■□□□□ 0.01
Prpf40bQ80W14 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf40bQ80W14 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Gm15782-201ENSMUST00000121073 445 ntBASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 B9d1os-201ENSMUST00000137010 674 ntBASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf40bQ80W14 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gm14263-201ENSMUST00000117955 746 ntBASIC15.1■□□□□ 0.01
Prpf40bQ80W14 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gm7046-201ENSMUST00000221351 977 ntBASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf40bQ80W14 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms