Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim62Q80V85 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim62Q80V85 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim62Q80V85 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim62Q80V85 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim62Q80V85 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim62Q80V85 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim62Q80V85 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim62Q80V85 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trim62Q80V85 Gm16177-201ENSMUST00000120728 718 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Gm4768-201ENSMUST00000206199 686 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Gm40466-201ENSMUST00000212174 422 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim62Q80V85 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim62Q80V85 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim62Q80V85 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.54□□□□□ -0.24
Trim62Q80V85 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim62Q80V85 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim62Q80V85 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm27731-201ENSMUST00000185192 107 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim62Q80V85 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm10268-201ENSMUST00000085340 555 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim62Q80V85 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.53□□□□□ -0.24
Trim62Q80V85 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim62Q80V85 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim62Q80V85 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim62Q80V85 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim62Q80V85 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim62Q80V85 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim62Q80V85 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim62Q80V85 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim62Q80V85 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim62Q80V85 Acot6-202ENSMUST00000222921 3622 ntBASIC13.52□□□□□ -0.25
Trim62Q80V85 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim62Q80V85 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim62Q80V85 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim62Q80V85 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim62Q80V85 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim62Q80V85 Gm1335-201ENSMUST00000121653 386 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms