Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rif1Q6PR54 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.04□□□□□ -0.64
Rif1Q6PR54 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Gm6644-201ENSMUST00000186507 951 ntBASIC11.04□□□□□ -0.64
Rif1Q6PR54 Gm9132-201ENSMUST00000210182 832 ntBASIC11.04□□□□□ -0.64
Rif1Q6PR54 Gm7904-201ENSMUST00000217049 465 ntBASIC11.04□□□□□ -0.64
Rif1Q6PR54 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.04□□□□□ -0.64
Rif1Q6PR54 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Efs-202ENSMUST00000227037 2540 ntBASIC11.04□□□□□ -0.64
Rif1Q6PR54 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rif1Q6PR54 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.03□□□□□ -0.64
Rif1Q6PR54 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gm12266-201ENSMUST00000120311 962 ntBASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.03□□□□□ -0.64
Rif1Q6PR54 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.03□□□□□ -0.64
Rif1Q6PR54 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.03□□□□□ -0.64
Rif1Q6PR54 Gm7985-201ENSMUST00000183329 981 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms