Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Snrnp40Q6PE01 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm11331-201ENSMUST00000119764 288 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm13492-201ENSMUST00000119772 665 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm9083-201ENSMUST00000120423 819 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Gm29787-201ENSMUST00000222129 849 ntBASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Snrnp40Q6PE01 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm12058-201ENSMUST00000118614 437 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm44405-201ENSMUST00000198952 126 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms