Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gm10268-201ENSMUST00000085340 555 ntBASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hmgb4Q6P8W9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Mir686-201ENSMUST00000102174 109 ntBASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm10146-201ENSMUST00000072739 309 ntBASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hmgb4Q6P8W9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gm37922-201ENSMUST00000195596 455 ntBASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Gm18041-201ENSMUST00000218210 618 ntBASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hmgb4Q6P8W9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms